Larvae of Nearshore Fishes in Oceanic Waters near Oahu, Hawaii

Larvae of over 50 families of nearshore fishes were taken in oceanic waters about 13 km offshore of the leeward (southwest) coast of Oahu, Hawaii during 1977-78, The five most frequently taken families (Labridae, Parapercidae, Serranidae, Gobiidae, and Carangidae) made up over 50% of the total nearshore larvae. Most other families were taken very infrequently. Comparison of catch data from three types of nets indicated that 1.25-m diameter bongo nets often sampled larvae as well or better than a 3-m Isaacs-Kidd trawl and that smaller, 70-cm diameter bongo nets were often as effective as the larger nets for certain abundant taxa. Only a few taxa showed evidence of seasonal patterns in abundance. Irregular temporal variability in abundance of some taxa may have been related to occasional recent influxes of surface water from closer to shore. Most larvae taken were late preflexion stage or older. Densities of even the most abundant taxa were rarely greater than 0.001 m-3. The nearshore fish larvae were not dominated by taxa with large larvae or with larvae possessing apparent specializations to pelagic existence, Most taxa taken were pelagic spawners as adults, but larvae of demersal spawners were roughly as well represented as demersal spawners are among the nearshore fish fauna. Previous studies of waters closer to shore probably sampled insufficient volumes for any but a few exceptionally abundant taxa. Sampling with volumes filtered of the order of 104-105 m3 will be necessary to determine if the dominant taxa taken by the present study are ever more abundant closer to shore, (PDF file contains 23 pages.

The Ecology of the Scalloped Hammerhead Shark, Sphyrna lewini, in Hawaiil

Kaneohe Bay, Oahu, is a pupping ground for the scalloped hammerhead shark, Sphyrna lewini, the pups being most abundant between April and October. While in the bay, the pups stay in the most turbid areas by day and move out at night to reef areas where they feed on reef fishes and crustaceans. The pups spend a maximum of three to four months in the bay and then apparently leave nearshore areas. The total number of pups passing through Kaneohe Bay may be as high as 10,000 per year. Adult hammerheads are present inshore also between April and October. They apparently move in for delivery and breeding. Squid beaks in their stomachs indicate that the adults are pelagic the rest of the year-possibly living below the surface layers

Collections and Submarine Observations of Deep Benthic Fishes and Decapod Crustacea in Hawaii

ABSTRACT: Depths between 150 and 400 m off Oahu, Hawaii, were surveyed by submarine, gill nets, and traps. Depth of capture or observations and other data are given for 47 species of fishes and 20 species of decapod Crustacea. Of these species, 10 fishes and five crustaceans are either undescribed or new records for Hawaii. Four other fishes collected and several others observed from the submarine are probably undescribed or unrecorded species. A large proportion of both the total number of species collected and of the new forms were taken by gill net. The gill nets are able to sample steep, rocky bottoms and obtain types of organisms inaccessible to other types of gear, particularly bottom trawls

Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics.

BackgroundAnimal venoms attract enormous interest given their potential for pharmacological discovery and understanding the evolution of natural chemistries. Next-generation transcriptomics and proteomics provide unparalleled, but underexploited, capabilities for venom characterization. We combined multi-tissue RNA-Seq with mass spectrometry and bioinformatic analyses to determine venom gland specific transcripts and venom proteins from the Western black widow spider (Latrodectus hesperus) and investigated their evolution.ResultsWe estimated expression of 97,217 L. hesperus transcripts in venom glands relative to silk and cephalothorax tissues. We identified 695 venom gland specific transcripts (VSTs), many of which BLAST and GO term analyses indicate may function as toxins or their delivery agents. ~38% of VSTs had BLAST hits, including latrotoxins, inhibitor cystine knot toxins, CRISPs, hyaluronidases, chitinase, and proteases, and 59% of VSTs had predicted protein domains. Latrotoxins are venom toxins that cause massive neurotransmitter release from vertebrate or invertebrate neurons. We discovered ≥ 20 divergent latrotoxin paralogs expressed in L. hesperus venom glands, significantly increasing this biomedically important family. Mass spectrometry of L. hesperus venom identified 49 proteins from VSTs, 24 of which BLAST to toxins. Phylogenetic analyses showed venom gland specific gene family expansions and shifts in tissue expression.ConclusionsQuantitative expression analyses comparing multiple tissues are necessary to identify venom gland specific transcripts. We present a black widow venom specific exome that uncovers a trove of diverse toxins and associated proteins, suggesting a dynamic evolutionary history. This justifies a reevaluation of the functional activities of black widow venom in light of its emerging complexity

Extreme summer heat in Phoenix, Arizona (USA) under global climate change (2041-2070)

Summer extreme heat events in the arid Phoenix, Arizona (USA) metropolitan region for the period 2041-2070 are projected based on the ensemble of ten climate models from the North American Regional Climate Change Assessment Program for the SRES A2 greenhouse gas emissions scenario by the Intergovernmental Panel on Climate Change. Extreme heat events are identified by measures related to two thresholds of the maximum daily air temperature distribution for the historical reference period 1971-2000. Comparing this reference period to the model ensemble-mean, the frequency of extreme heat events is projected to increase by a factor of six to 1.9 events per summer and the average number of event days per year is projected to increase by a factor of 14. The inter-model range for the average number of EHE days per summer is larger for the projected climate, 10.6 to 42.2 days, than for simulations of the past climate simulations (1.5 to 2.4 days)

Mechanisms of Bacterial Extracellular Electron Exchange.

The biochemical mechanisms by which microbes interact with extracellular soluble metal ions and insoluble redox-active minerals have been the focus of intense research over the last three decades. The process presents two challenges to the microorganism; firstly electrons have to be transported at the cell surface, which in Gram negative bacteria presents an additional problem of electron transfer across the ~ 6 nm of the outer membrane. Secondly the electrons must be transferred to or from the terminal electron acceptors or donors. This review covers the known mechanisms that bacteria use to transport electrons across the cell envelope to external electron donors/acceptors. In Gram negative bacteria electron transfer across the outer membrane involves the use of an outer membrane β-barrel and cytochrome. These can be in the form of a porin-cytochrome protein, such as Cyc2 of Acidothiobacillus ferrioxydans, or a multiprotein porin-cytochrome complex like MtrCAB of Shewanella oneidensis MR-1. For mineral respiring organisms there is the additional challenge of transferring the electrons from the cell to mineral surface. For the strict anaerobe Geobacter sulfurreducens this requires electron transfer through conductive pili to associated cytochrome OmcS that directly reduces Fe(III)oxides, while the facultative anaerobe S. oneidensis MR-1 accomplishes mineral reduction through direct membrane contact, contact through filamentous extentions and soluble flavin shuttles, all of which require the outer membrane cytochromes MtrC and OmcA in addition to secreted flavin

Model Checking CTL is Almost Always Inherently Sequential

The model checking problem for CTL is known to be P-complete (Clarke, Emerson, and Sistla (1986), see Schnoebelen (2002)). We consider fragments of CTL obtained by restricting the use of temporal modalities or the use of negations---restrictions already studied for LTL by Sistla and Clarke (1985) and Markey (2004). For all these fragments, except for the trivial case without any temporal operator, we systematically prove model checking to be either inherently sequential (P-complete) or very efficiently parallelizable (LOGCFL-complete). For most fragments, however, model checking for CTL is already P-complete. Hence our results indicate that, in cases where the combined complexity is of relevance, approaching CTL model checking by parallelism cannot be expected to result in any significant speedup. We also completely determine the complexity of the model checking problem for all fragments of the extensions ECTL, CTL+, and ECTL+

Evaluation of Four-Factor Prothrombin Complex Concentrate Dosing Strategies for the Reversal of Bleeding Associated with Apixaban or Rivaroxaban

In clinical practice, 4F-PCC is commonly used off-label as a non-specific reversal agent for factor Xa inhibitors apixaban and rivaroxaban. While the hemostatic effectiveness of 4F-PCC in patients taking apixaban and rivaroxaban has been studied in the literature, the optimal dose remains unclear. This was a multicenter, retrospective observational study designed to evaluate the hemostatic effectiveness and safety of 4F-PCC dosed at 2000 units, 35 units/kg, and 50 units/kg for the reversal of bleeding associated with apixaban or rivaroxaban. The primary outcome was hemostatic effectiveness as defined by the Internal Society of Thrombosis and Hemostasis and secondary outcomes were rates of all-cause in-hospital mortality and thrombosis at 30 days or discharge. Out of 278 patients who received 4F-PCC for reversal of bleeding associated with apixaban or rivaroxaban, 72 patients were included in the final analysis. The 2000-unit, 35 unit/kg, and 50 unit/kg dosing strategies were used in 12, 36, and 24 patients, respectively. Hemostatic effectiveness was achieved in 86%, 67%, and 70% of intracerebral hemorrhages (p = 0.762) and 60%, 71%, 86% of gastrointestinal hemorrhages (p = 0.422). Neither dosing strategy was associated with a statistically significantly higher rate of hemostatic effectiveness nor lower rates of all-cause mortality or thrombosis

Reactions of azoalkenes derived from hydrazones of ethyl bromopyruvate with electron rich alkenes and heterocycles

Three hydrazones of ethyl bromopyruvate, the dinitrophenylhydrazone 2a, the toluene-4-sulphonylhydrazone 2b and the t-butoxycarbonylhydrazone 2c, have been reacted with a series of nucleophilic alkenes and heterocycles in the presence of sodium carbonate. Azoalkenes 3 are presumed as intermediates and adducts have been isolated. The azoalkenes derived from hydrazones 2a and 2c are found to be useful electrophiles and electrophilic dienes

The Crystal Structure of the Extracellular 11-heme Cytochrome UndA Reveals a Conserved 10-heme Motif and Defined Binding Site for Soluble Iron Chelates

Members of the genus Shewanella translocate deca- or undeca-heme cytochromes to the external cell surface thus enabling respiration using extracellular minerals and polynuclear Fe(III) chelates. The high resolution structure of the first undeca-heme outer membrane cytochrome, UndA, reveals a crossed heme chain with four potential electron ingress/egress sites arranged within four domains. Sequence and structural alignment of UndA and the deca-heme MtrF reveals the extra heme of UndA is inserted between MtrF hemes 6 and 7. The remaining UndA hemes can be superposed over the heme chain of the decaheme MtrF, suggesting that a ten heme core is conserved between outer membrane cytochromes. The UndA structure has also been crystallographically resolved in complex with substrates, an Fe(III)-nitrilotriacetate dimer or an Fe(III)-citrate trimer. The structural resolution of these UndA-Fe(III)-chelate complexes provides a rationale for previous kinetic measurements on UndA and other outer membrane cytochromes